PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf00590g23022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 386aa    MW: 44133 Da    PI: 7.0894
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf00590g23022.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.2e-08210257455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peinf101Scf00590g23022.1 210 SHSLAERARREKIGKKMKCLQDLVPGC----NKVIGKAGMLDEIINYVQSLQ 257
                               8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-15204269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.06E-6204261No hitNo description
PROSITE profilePS5088814.665206256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-16206269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-6210257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-9212262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MLGRVQSSPD NHSDYNEEMS VLERQRAIFQ RLYESQQQIS SLSYQNLAQC NSLISEQIVN  60
GTQFQDFPVK IDPQMDQNSS FLNMFDREQR NWSSSDFTNN NSLELARQSF STVSNSSITT  120
TSRPLLKENV VSTKKRKAEV FCLFDLQFVE EGNCKTKKHE GEAGEVKSEI IVENEKVTST  180
NNLKENSTNS EVKKPDYIHV RARRGQATDS HSLAERARRE KIGKKMKCLQ DLVPGCNKVI  240
GKAGMLDEII NYVQSLQKQV EFLSMKLAAS NNTDSNLFAT YMANFPTMAA PSTLEIANIP  300
AFLQNNLIQQ QQGSRRKKFS IKVQECQISI IMDSFLRNLI LNPVAHAMLF HIFQMESTSF  360
EVSNYIREDL PSNLLYFILF FSYVLE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754427e-57HG975442.1 Solanum pennellii chromosome ch03, complete genome.
GenBankHG9755157e-57HG975515.1 Solanum lycopersicum chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803326.11e-121PREDICTED: transcription factor HBI1-like isoform X1
TrEMBLM1C2718e-83M1C271_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000581695e-82(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.19e-48BR enhanced expression 2